Insertion junction: CLIP2.069456_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.069456
Chromosome:chromosome 13
Location:1760483
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g574650 (1 of 2) 3.6.1.62 - 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase / M(7)GpppN-mRNA hydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTATTGCAGATTGGGCTCTTACACGTCACCGCGAAGCAGGCCACTTCA
Internal bar code:TTTTCATGGGTGTTCGTTGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1827
LEAP-Seq percent confirming:97.7011
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCACAGGAGCTGAAAGAG
Suggested primer 2:ACACGTTTTTGGGCGGATTG