Insertion junction: CLIP2.069459_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.069459
Chromosome:chromosome 9
Location:2233234
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801012 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGACGCTGATGCGGAGGAGGAGGTGGTGGAGGAGGAGGAGGCTCAGCTG
Internal bar code:GAGTCCCGTTTGTTGAAGGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1787
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTGGGAACAAGTACACGC
Suggested primer 2:CAGCTACAGCCTCTGAGCTC