Insertion junction: CLIP2.069459_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069459
Chromosome:chromosome 17
Location:5365074
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g738150 ERM10 (1 of 13) PTHR13018//PTHR13018:SF5 - PROBABLE MEMBRANE PROTEIN DUF221-RELATED // PHOSPHATE METABOLISM PROTEIN 7; ERD4-related membrane protein 3'UTR
Cre17.g738200 (1 of 1) IPR011033//IPR027275 - PRC-barrel-like // PRC-barrel domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCTCAAGTCCGCCGAGCTGCACTGCAGTGGGAACCAGGTGTGGGGGGA
Internal bar code:TTGATTGGGCTGGCACGGTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1574
LEAP-Seq percent confirming:38.806
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCCCTTGCGCAATGTATG
Suggested primer 2:GGTAGAGGAGTGGCTTGCG