Insertion junction: CLIP2.069476_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069476
Chromosome:chromosome 3
Location:6353683
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g192400 (1 of 1) IPR013769 - Band 3 cytoplasmic domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAACCCAGGGGCACGCCTCGTTCACACGATCAAGCCTGTGCTGTATTG
Internal bar code:AGTGATGACTCCGTCGTGTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2272
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GCAATCATGGTGATGACCGC
Suggested primer 2:CTCGGCACAAGTGTACTGGT