Insertion junction: CLIP2.069477_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.069477
Chromosome:chromosome 3
Location:2124596
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g156700 FAP185,Nphp3 (1 of 2) IPR011990//IPR013026//IPR019734 - Tetratricopeptide-like helical domain // Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat; Flagellar Associated Protein 185 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTGGGGTGGAAGGCGCAGCCGGCCATGCAGACAGAGAAGTTTGTTTA
Internal bar code:ACCATATTTTCATTGTTTCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:231
LEAP-Seq percent confirming:3.125
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCGCCCTACACCTACTAA
Suggested primer 2:GACACACGAACACACACACG