Insertion junction: CLIP2.069485_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069485
Chromosome:chromosome 1
Location:7706483
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g054150 NTRC1,NTR4 (1 of 1) PTHR10438//PTHR22912//PTHR22912:SF48 - THIOREDOXIN // DISULFIDE OXIDOREDUCTASE // NADPH-DEPENDENT THIOREDOXIN REDUCTASE 3; NADPH-dependent thioredoxin reductase C, chloroplastic 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAACGAAGCCATTTTAAGGAATTCGGCCACTGACGCCGCCCCTGCCTTC
Internal bar code:TCATTGGGTTCAGGATGATTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2817
LEAP-Seq percent confirming:98.6842
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGATGCACTGGAATGACA
Suggested primer 2:AGCGCTCGTATCTTCCTTCG