Insertion junction: CLIP2.069492_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069492
Chromosome:chromosome 12
Location:7251219
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g558800 (1 of 2) IPR000104//IPR017923 - Antifreeze protein, type I // Transcription factor IIS, N-terminal 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGGTCCCCCACATCCGGGCTAAAAGCCCCAACGGCTGCTGCGGAGCAA
Internal bar code:CCGATGAGGAAACGCCTTGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2227
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:AACATGACTAGGAGGCTGCG
Suggested primer 2:GAAAGGGATGGGGTGGAAGG