Insertion junction: CLIP2.069493_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069493
Chromosome:chromosome 2
Location:4141905
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre02.g800224 CDS
lncRNA_TCONS_00041505 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCTCATGGACCCCAGCCAAGCAGCCCGCTTCACGCACCTCAATCCGCA
Internal bar code:GGATTAGTGGGACAAGGACACC

Confirmation - LEAP-Seq

LEAP-Seq distance:1024
LEAP-Seq percent confirming:5.55556
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGGGGGCTATGGGTTGTG
Suggested primer 2:ACCCTGGGGCATCTAGATGT