Insertion junction: CLIP2.069507_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069507
Chromosome:chromosome 17
Location:5202648
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g737050 (1 of 1) PTHR22957//PTHR22957:SF287 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTACGAGGAAGAACACCGCTTACTTGCGGCGTGGCCGATGTTGGTTTG
Internal bar code:AGACTACGACAGCTATATGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4123
LEAP-Seq percent confirming:80.9524
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:63

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGTGCCTTGGCATTTTC
Suggested primer 2:TCCGAGTGGTGGTACCGTAT