Insertion junction: CLIP2.069508_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069508
Chromosome:chromosome 3
Location:1812478
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g154200 (1 of 1) PTHR15970//PTHR15970:SF2 - FAMILY NOT NAMED // ELL-ASSOCIATED FACTOR EAF 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCTTCCCCCAACCGGTTGTAGCCATATCCACCACACGTTCCTCCAACC
Internal bar code:TTAGTCGAGGAATAGGCCTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4981
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:113
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:113

Suggested primers for confirmation by PCR

Suggested primer 1:GATGAAGACCTGGGTGGAGC
Suggested primer 2:AACTCCACAGCTACACCACG