Insertion junction: CLIP2.069509_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069509
Chromosome:chromosome 8
Location:4046892
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382750 (1 of 7) IPR000104//IPR020683 - Antifreeze protein, type I // Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTACACATTCTCGGCTGATCCCGCCACTACCACATGCTTATGTAATAT
Internal bar code:CAAGATCAGGCAGCTAGGGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3408
LEAP-Seq percent confirming:90.3846
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCGTACTAGGTGTGGCAG
Suggested primer 2:CTGTGGGTATGCCAGTGTGT