Insertion junction: CLIP2.069511_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069511
Chromosome:chromosome 12
Location:3832544
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g514950 CGLD17,HEL53 (1 of 1) PTHR12873//PTHR12873:SF0 - T7-LIKE MITOCHONDRIAL DNA HELICASE // TWINKLE PROTEIN, MITOCHONDRIAL; Conserved in the Green Lineage and Diatoms 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATCTGGATTCGGTCGCGGCGTCCCGGGACGTGGCTGGACACATTATG
Internal bar code:TGAAGGTCGGTGGGAGTGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2427
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GACGTGAACTCATGCGCATC
Suggested primer 2:GCAGTTGGGTCGTAGAAGCT