Insertion junction: CLIP2.069512_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069512
Chromosome:chromosome 3
Location:2552843
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g159800 (1 of 1) PTHR21262//PTHR21262:SF0 - GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE // GUANOSINE-3',5'-BIS(DIPHOSPHATE) 3'-PYROPHOSPHOHYDROLASE MESH1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTATCAATCGTCTGGCATCGGTGGAGCTCGATGCTCCTCGACGAAGGCG
Internal bar code:GTATACACAGATTGCGTTGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4663
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGGCTGCTGATGTATTGC
Suggested primer 2:CTTGGAAGAAGGGAGGGCTG