Insertion junction: CLIP2.069518_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.069518
Chromosome:chromosome 9
Location:882335
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403450 (1 of 6) PF12796//PF13920 - Ankyrin repeats (3 copies) (Ank_2) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGACGGGCCGCTGGAAGCTATGAGCGCGAAGCTCCCTTCAAAAACGCGG
Internal bar code:AGCGTGGGTAGCTAGATGGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3485
LEAP-Seq percent confirming:63.4615
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCTGGCGCCATAAGACTT
Suggested primer 2:AGTTAGCGAACGCCTGTCAA