Insertion junction: CLIP2.069519_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.069519
Chromosome:chromosome 6
Location:5082585
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g282450 PFH18,PHX11 (1 of 1) PTHR10869//PTHR10869:SF91 - PROLYL 4-HYDROXYLASE ALPHA SUBUNIT // SUBFAMILY NOT NAMED; Putative prolyl 4-hydroxylase intron
Cre06.g800695 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTGAGTCTGAGTCTTGTTACTTTTGACTGGTACTGAGGAGAGCGGAGA
Internal bar code:GTTTTTCTAATTGTATTCGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:485
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TACGACAACAAGACCGGTGG
Suggested primer 2:CGGCCCTCTACATGTCTGTC