Insertion junction: CLIP2.069522_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069522
Chromosome:chromosome 4
Location:690971
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217953 (1 of 2) PTHR15241:SF0 - TRANSFORMER-2 SEX-DETERMINING PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTGTCGTAGGCCGTGTACCGTATAACAAAGTTGGCAGGTAAGAGTCTG
Internal bar code:GTATGGCTACAGGGTAGGACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3493
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGCGAGAACTGTTTGGA
Suggested primer 2:TTAACCTGTGACGCCTGACC