Insertion junction: CLIP2.069530_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069530
Chromosome:chromosome 1
Location:3443441
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g022350 HEL3 DEAH box ATP-dependent RNA helicase; (1 of 1) K14805 - ATP-dependent RNA helicase DDX24/MAK5 [EC:3.6.4.13] (DDX24, MAK5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAGCAAACACACGCCGTTGCAAGCCAGCTCCCATCTTGCCCCCCCCA
Internal bar code:GGGATAATCGTATTCCCGGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:111
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGTGTGTGTGTGTGTGC
Suggested primer 2:CTCATGCGGTCAGGACAACT