Insertion junction: CLIP2.069538_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.069538
Chromosome:chromosome 9
Location:631144
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g404950 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAAAAGTCAAAGGGCGCACAGGGTAATGGCACGGTTGGGAGCGAGTGG
Internal bar code:CTTGATGTACTTGATTCTATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:140
LEAP-Seq percent confirming:41.6667
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTTTGTTCATGGTGCGTG
Suggested primer 2:GTAGATAGATGCGGGCCCAC