Insertion junction: CLIP2.069544_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069544
Chromosome:chromosome 13
Location:1900267
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575800 IGS1 Indole-3-glycerol-phosphate synthase; (1 of 2) 4.1.1.48 - Indole-3-glycerol-phosphate synthase / Indoleglycerol phosphate synthetase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCACAACTGCCCATGCCTGCGCCCCGTAGTCGTTTGGGCTGGTATCTA
Internal bar code:CCTTTGAGGGTATATAGGAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:694
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCGGGAAGAGACAAGAC
Suggested primer 2:GAGCCTGCTGTTACTTCCGT