Insertion junction: CLIP2.069550_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.069550
Chromosome:chromosome 17
Location:5747179
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g740850 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR
Cre17.g740900 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGATGAGACGGGCAGACGGCGGGCGAGTAGTGCTGTCCGATGCGACTA
Internal bar code:AGAATAGTGGACTTCAGTCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4121
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:ACATGTCACACGTAGGCCTG
Suggested primer 2:GCAGGGGTATCTGTTGTGCT