Insertion junction: CLIP2.069551_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.069551
Chromosome:chromosome 17
Location:121817
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g696750 (1 of 4) IPR001005//IPR006447//IPR009057//IPR017930 - SANT/Myb domain // Myb domain, plants // Homeodomain-like // Myb domain outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTACACATTACAGGGACCGCATCTCTCCGCATGCGCTGGTAATGGTTGT
Internal bar code:AAATTGGCATCGGCGGTTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:681
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GACACAGCACCAAAGCACTG
Suggested primer 2:GAGGGAGGGGCTTTTCTTCC