Insertion junction: CLIP2.069553_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.069553
Chromosome:chromosome 15
Location:614968
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g636650 (1 of 1) PF12251 - snRNA-activating protein of 50kDa MW C terminal (zf-SNAP50_C) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTACAAAAGAGGACAACCCGAGCCCCAGCCGCCAGATAAGGGGCGACG
Internal bar code:GCAGTTGAAATATAGAGGCCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2947
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GGTAGCTGGAGAGGGGGTTA
Suggested primer 2:TAGGAGGAACCGAGTGGGAG