Insertion junction: CLIP2.069553_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.069553
Chromosome:chromosome 15
Location:614974
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g636650 (1 of 1) PF12251 - snRNA-activating protein of 50kDa MW C terminal (zf-SNAP50_C) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAACACCGCAAGGCTGCTGACCTGCTGACCTGCTGTGCCAACTGGGTTT
Internal bar code:AGGCATTGCAGCAACGCGTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:644
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGAGGAACCGAGTGGGAG
Suggested primer 2:GGTAGCTGGAGAGGGGGTTA