Insertion junction: CLIP2.069556_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069556
Chromosome:chromosome 10
Location:4858942
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g453500 RWP15 (1 of 17) IPR003035 - RWP-RK domain; RWP-RK transcription factor 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGGCCGTCACCCAAGTCTGCACTCACCCACGCCTCGGCCGGCCCCGGC
Internal bar code:CGACGAGGGTACGCGTTGAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2549
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGACACTTTCAGCGGTA
Suggested primer 2:CAACAAAGGTCGGCTTGCTC