Insertion junction: CLIP2.069561_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.069561
Chromosome:chromosome 13
Location:678963
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g566300 RRM12,RSMD (1 of 1) 2.1.1.171 - 16S rRNA (guanine(966)-N(2))-methyltransferase / M(2)G966 methyltransferase; Putative rRNA (guanine-N2-)-methyltransferase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGGGACCCAGCCCCACGGTCGCCGCCGCTGCCGCCTCCGCTCTCCTCA
Internal bar code:TGACAACTTATCAACCTAAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:938
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACGCGTACTGTATGCA
Suggested primer 2:CTCCGCAACAGGTGTAAGGT