Insertion junction: CLIP2.069561_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.069561
Chromosome:chromosome 13
Location:678971
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g566300 RRM12,RSMD (1 of 1) 2.1.1.171 - 16S rRNA (guanine(966)-N(2))-methyltransferase / M(2)G966 methyltransferase; Putative rRNA (guanine-N2-)-methyltransferase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTCGTCGCAACTGCCCACTGATTGGGCGAGGGCTGCGTGGCTGTCGGT
Internal bar code:ACTCTTTAAGCTTGTTTCACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4689
LEAP-Seq percent confirming:92.7711
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCGCAACAGGTGTAAGGT
Suggested primer 2:ACACACGCGTACTGTATGCA