Insertion junction: CLIP2.069563_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.069563
Chromosome:chromosome 6
Location:1162849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g258100 (1 of 2) PTHR12436//PTHR12436:SF4 - 80 KDA MCM3-ASSOCIATED PROTEIN // LEUKOCYTE RECEPTOR CLUSTER MEMBER 8 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAATGGCGCCGAGGCGTAAGAGGACTGCCAGGGCGCGGCGCCGAATCTGA
Internal bar code:GGATTGAATTATATCCAAGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1742
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TAACCGCAAGCAGACGAGTT
Suggested primer 2:GGTCGTAGCCGTAATACCCG