Insertion junction: CLIP2.069578_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069578
Chromosome:chromosome 13
Location:1206212
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre13.g570050 HTB20,HTB2 (1 of 27) K11252 - histone H2B (H2B); Histone H2B CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTGCTCAAGCAGGTGCACCCCGACACCGGCATCAGCAGCAAGGCCATG
Internal bar code:TCCTTTCGCTTTGATGCTATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:572
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAAGGCACAACTACGTCC
Suggested primer 2:CGCGACCAGCCATTGTAATG