Insertion junction: CLIP2.069580_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069580
Chromosome:chromosome 14
Location:1859171
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g619850 ELG36 (1 of 2) 2.7.7.52 - RNA uridylyltransferase / TUT; Exostosin-like membrane protein, a heparan sulfate glycosyltransferase 5'UTR
Cre14.g619854 ELG35 (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase; Exostosin-like glycosyltransferase 35 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCAACACCTTTACCATCGCACTGCTGAAGACTGCGACGACGCAAGACC
Internal bar code:TGGCTGTCGACCCGCTTCGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1527
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GACAAAGGTGCCAGCAATCG
Suggested primer 2:CTGCTGGAGTGCTGGGTAAA