Insertion junction: CLIP2.069581_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069581
Chromosome:chromosome 3
Location:208848
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144224 (1 of 2) IPR013137 - Zinc finger, TFIIB-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCTGTGTAGCTCGACGCTTCGCGTTGCAACGCGGGCTCTTGTTGATGA
Internal bar code:TTTAAATTACGTTTGTAAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5953
LEAP-Seq percent confirming:98.2456
LEAP-Seq n confirming:112
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:114

Suggested primers for confirmation by PCR

Suggested primer 1:TAGTGCGGTTTGCTGTACGT
Suggested primer 2:GTGCTGTGAACTGTGCAGTG