Insertion junction: CLIP2.069583_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.069583
Chromosome:chromosome 9
Location:3670964
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g397142 ADF1,TRP15 (1 of 6) PTHR10117 - TRANSIENT RECEPTOR POTENTIAL CHANNEL; Acid-induced Ca transient receptor channel CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGCGGGCGGCAAGCAGTCGCGCGTGCAGGCGCTGAAGGTGCGTGTGTG
Internal bar code:GTTTATCTCTAAGAGAGTTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:276
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCAACCCAATGCCAAAG
Suggested primer 2:CCTTCGCCTCCATTCCCTTT