Insertion junction: CLIP2.069593_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.069593
Chromosome:chromosome 10
Location:465378
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g420900 HEL44 (1 of 1) K13181 - ATP-dependent RNA helicase DDX27 [EC:3.6.4.13] (DDX27, DRS1); DEAD/DEAH box helicase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCCACCTCACCGCTCACCTGTGCAGCTCACCCCGGTCCCCGTAGCCTC
Internal bar code:GAAGAAGCGGACCCCTATGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1409
LEAP-Seq percent confirming:82.6087
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTCCTTACAAGTCCCGGC
Suggested primer 2:AACGTAGGAATGCCCGTTGT