Insertion junction: CLIP2.069598_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.069598
Chromosome:chromosome 5
Location:3600642
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234300 (1 of 1) K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCGTTATCTCCAAGAGTCTAGTATTTTTACGGTGGGTAGGGAAACGG
Internal bar code:TACCTTTCGGCCCGTGTGGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:7226
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:93
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:AACGCCCCATTCACCATCAT
Suggested primer 2:CGGTCAGCTGGTGTTACACT