Insertion junction: CLIP2.069598_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069598
Chromosome:chromosome 5
Location:3600677
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234300 (1 of 1) K12175 - COP9 signalosome complex subunit 1 (GPS1, COPS1, CSN1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCCACAACACCAACATCTGGACCGCTCGCCGTAGACGGCCGGCTTAG
Internal bar code:GGGATGGCAGCGAGGTGGACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1352
LEAP-Seq percent confirming:46.4646
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:53
LEAP-Seq n unique pos:99

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTCAGCTGGTGTTACACT
Suggested primer 2:AACGCCCCATTCACCATCAT