Insertion junction: CLIP2.069600_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.069600
Chromosome:chromosome 10
Location:1213301
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g426250 (1 of 1) K14800 - pre-rRNA-processing protein TSR2 (TSR2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTGCGGATGGATGTATGCGCGTGGTGGTTTGGTGGTTCCGGAGTTGGG
Internal bar code:TCATTAGTTACGTAGGTTATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1971
LEAP-Seq percent confirming:82.9268
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GGTATGGTGCGATGCGTAGA
Suggested primer 2:GCTGTGACGTGTGTCCAAAC