Insertion junction: CLIP2.069606_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.069606
Chromosome:chromosome 7
Location:4090152
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g342950 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAAACCTCCCTGCCCAGCATCCCTAGCGTCTCCATAGCGGCCGGAAGT
Internal bar code:CCGCGCAGCGTCCTAACAGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1379
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGAAACCCTGGAGCTCAA
Suggested primer 2:CTGCCGATGCTCTATCACGT