Insertion junction: CLIP2.069607_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069607
Chromosome:chromosome 16
Location:2259737
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g658526 MNME1,TGD3,MNME (1 of 1) K03977 - GTP-binding protein (engA); Putative ABC transport system ATP-binding protein 5'UTR
Cre16.g658600 SPC25, SPCB25 (1 of 1) K11550 - kinetochore protein Spc25, animal type (SPBC25, SPC25); Putative kinetochore protein Spc25 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGATAAATAGTTATTGTTACAAGAACAATCGCTGTGCTTACGGCAAGGC
Internal bar code:ACGAGAGGATCCGACTGACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1692
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGGTCAAAGTCCTGGAC
Suggested primer 2:GACAGGGAGAGCCACCTTTC