Insertion junction: CLIP2.069613_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.069613
Chromosome:chromosome 2
Location:890514
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g078950 MMP17 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTGGTGCGAGACCACGGTCAAAAGCTGATCGAGTCAAATGACGTGGA
Internal bar code:ACGGCTTTCATGAGTCTAGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4386
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGAATAGAAGCGCGGTG
Suggested primer 2:CGCTTGATCGCATGTGTAGC