Insertion junction: CLIP2.069617_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069617
Chromosome:chromosome 6
Location:1892777
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g264150 MAW11 Membrane-associated hydroxyproline-rich glycoprotein 11; (1 of 1) 2.1.1.53 - Putrescine N-methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTTGACACCCAGTAAAGCCCTTGGAACACCTGTCGTGCTTGCCCAACG
Internal bar code:GGGACACCCTCGAATGTAGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1167
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGGTTGTCGCTGGTGTGA
Suggested primer 2:TTCAGTGACCTTTCGTCCGG