Insertion junction: CLIP2.069623_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.069623
Chromosome:chromosome 1
Location:1028041
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g006050 LF3 Long Flagella protein 3; (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCAGACGGAGGACGTGGCGTGGCGGCACAGCCCACTTTTCCCTTGCGA
Internal bar code:GCTTTAATTCGGTCTTGACCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1551
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCGTGATGTTTGCCTGTG
Suggested primer 2:CCTGCCTGCGTTGACAAAAA