Insertion junction: CLIP2.069623_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069623
Chromosome:chromosome 1
Location:1028045
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g006050 LF3 Long Flagella protein 3; (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTTCCGATACTAGCCTCATCTCCCGGACATAGCCGGGGTCGGTTTGTA
Internal bar code:GCTTTAATTCGGTCTTGACCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3431
LEAP-Seq percent confirming:39.3939
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCCTGCGTTGACAAAAA
Suggested primer 2:TTGCGTGATGTTTGCCTGTG