Insertion junction: CLIP2.069626_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069626
Chromosome:chromosome 2
Location:5308784
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g113050 (1 of 2) PTHR23344:SF28 - GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 1 3'UTR
Cre02.g113100 (1 of 1) PTHR14154:SF3 - MITOCHONDRIAL PYRUVATE CARRIER 1 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATGCAGCGATTACAAGGCCGCGCTGGCGGGCGTCGGGTGCACGCATGC
Internal bar code:CTAGAACCTGATACGCTAAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3028
LEAP-Seq percent confirming:86.2903
LEAP-Seq n confirming:107
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:124

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGGAAGCGCGTCATAAG
Suggested primer 2:TCCGTTGCGTCACCCAAATA