Insertion junction: CLIP2.069641_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.069641
Chromosome:chromosome 13
Location:2116828
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g577400 ELG16 (1 of 1) IPR000742//IPR004263//IPR009030//IPR013111 - EGF-like domain // Exostosin-like // Insulin-like growth factor binding protein, N-terminal // EGF-like domain, extracellular; Exostosin-like glycosyltransferase 16 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAGGGTGCACGTGTCGATTGGCGGCGAGTGACGTGACTAGTTTGTTAG
Internal bar code:ATGATTAGTCTGTCAGAAGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2780
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACAGTGCGTGTACTTCT
Suggested primer 2:ATAAGGCCGCGAAGGGTATG