Insertion junction: CLIP2.069642_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069642
Chromosome:chromosome 10
Location:363182
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre10.g420450 (1 of 2) PTHR18841:SF0 - PROTEIN C08G5.3, ISOFORM A-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGACGTCTTTTCGCTCTGCGCCGGCTACAACTGGGCAGGTGGGTGCGGG
Internal bar code:CTCTAAATACAGACTGTACGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:542
LEAP-Seq percent confirming:46.6667
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TCCACGATCTTCCACTTGCC
Suggested primer 2:AGCTCAACCTGTCATCACCG