Insertion junction: CLIP2.069644_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.069644
Chromosome:chromosome 6
Location:5884074
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g289600 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR
Cre06.g289650 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGGTTTTCTGGAGGGCGTGCTGTTGGGACGTCGACTTGTAACCACTAG
Internal bar code:GCGTGACGCAAGTCATCACTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3417
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGGATGTGACTGTGGGTC
Suggested primer 2:TTGTTTGATGTCTGCGCTGC