Insertion junction: CLIP2.069645_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.069645
Chromosome:chromosome 14
Location:3042169
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g627850 (1 of 2) 1.17.1.8 - 4-hydroxy-tetrahydrodipicolinate reductase / Dihydrodipicolinate reductase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTACACCTTTTTCTATTATAGTATTCCCTTGGCATTATCATCAGAACA
Internal bar code:ATTCGCAGTGTCAACTTGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1625
LEAP-Seq percent confirming:97.8723
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CATTACAGCCGGCGGACTAT
Suggested primer 2:CTGTACACTGGCACGTTCCT