Insertion junction: CLIP2.069646_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.069646
Chromosome:chromosome 1
Location:1502061
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g008100 (1 of 34) IPR000571 - Zinc finger, CCCH-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCCAAAAGAAAATGGGGGCGGCTGCCGTTCTTGAGTTACGGTGCCTTG
Internal bar code:CACCGGACCAACTCCTTTTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2767
LEAP-Seq percent confirming:95.2
LEAP-Seq n confirming:119
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:125

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTGCGCGCATTCACAGAA
Suggested primer 2:TCGGTCCGTTAGCCAAACAA