Insertion junction: CLIP2.069660_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.069660
Chromosome:plastome
Location:24885
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreCp.g802274 2717055,ChreCp012,rpl2 50S ribosomal protein L2; (1 of 2) IPR005880 - Ribosomal protein L2, bacterial/organellar-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACGTAAAATAGCAGTAAGCATAAGTATGGCCACTTGCTTAAATTTTAC
Internal bar code:TAGTCGACCGTTCTTTCATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:63
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAAAGAGCTGCAAGACAA
Suggested primer 2:AGCCGTCCAGTTACACCATG