Insertion junction: CLIP2.069665_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.069665
Chromosome:chromosome 13
Location:2710352
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre13.g581801 (1 of 1) PTHR13198//PTHR13198:SF4 - RING FINGER PROTEIN 25 // E3 UBIQUITIN-PROTEIN LIGASE RNF25 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTAAATTGCGACTGCACGAACGAGCGGCTTCGGGCATTATCATGCATCG
Internal bar code:AGCAACCAGGAGCTATAATTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:269
LEAP-Seq percent confirming:17.2414
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAAGTTGTTAAGCCACGC
Suggested primer 2:CTGTCCTGGACCATGGTGTC