Insertion junction: CLIP2.069672_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.069672
Chromosome:chromosome 2
Location:5091880
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g111350 (1 of 54) IPR001680//IPR017986 - WD40 repeat // WD40-repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAAGCTGAATCTCGCGCCCTATGGAGTATGGACCGAGTACGTTTGTGG
Internal bar code:CGGGGGTCCGTGATTAGCTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:84
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTGGAAACCGTAGTCACA
Suggested primer 2:CAGACTAAGGGGCAGGTTGG